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CHR929 protein (Populus trichocarpa) - STRING interaction network
"CHR929" - Transcriptional activator family protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CHR929Transcriptional activator family protein; Chromatin remodeling complex subunit [source-UniProtKB/TrEMBL;Acc-B9IHX1_POPTR] (1535 aa)    
Predicted Functional Partners:
POPTR_0017s07490.1
Uncharacterized protein; Histone acetyltransferase [source-UniProtKB/TrEMBL;Acc-B9IJA8_POPTR] (1820 aa)
     
 
  0.970
HAF902
Ubiquitin family protein; Histone acetyltransferase [source-UniProtKB/TrEMBL;Acc-B9HED4_POPTR] (1848 aa)
     
 
  0.970
POPTR_0010s20950.1
Actin/actin-like family protein; Actin-related protein 5; Belongs to the actin family (768 aa)
     
 
  0.964
POPTR_0004s20930.1
annotation not available (455 aa)
     
 
  0.949
POPTR_0016s10950.1
RuvB-like helicase; Belongs to the RuvB family (467 aa)
     
 
  0.949
POPTR_0006s12040.1
RuvB-like helicase; Belongs to the RuvB family (467 aa)
     
 
  0.949
POPTR_0016s13490.1
Uncharacterized protein (123 aa)
       
 
  0.949
POPTR_0009s16220.1
RuvB-like helicase; Belongs to the RuvB family (441 aa)
       
 
  0.948
ARP901
Actin-related family protein; Actin related protein [source-UniProtKB/TrEMBL;Acc-B9I2R4_POPTR]; Belongs to the actin family (441 aa)
     
 
  0.939
POPTR_0003s01660.1
Uncharacterized protein (418 aa)
 
 
 
  0.938
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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