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POPTR_0018s06240.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0018s06240.1" - tRNA methyltransferase 5 homolog in Populus trichocarpa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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POPTR_0018s06240.1tRNA methyltransferase 5 homolog ; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (521 aa)    
Predicted Functional Partners:
POPTR_0005s17060.1
Predicted protein (122 aa)
     
 
  0.659
POPTR_0002s09700.1
Predicted protein (122 aa)
     
 
  0.659
POPTR_0007s05110.1
Predicted protein (799 aa)
     
   
  0.604
POPTR_0018s12420.1
Predicted protein (311 aa)
     
   
  0.591
POPTR_0017s13360.1
Predicted protein (583 aa)
     
   
  0.582
POPTR_0004s11710.1
Predicted protein (582 aa)
     
   
  0.582
POPTR_0002s26220.1
Predicted protein (1307 aa)
     
   
  0.582
POPTR_0019s08410.1
Predicted protein; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (316 aa)
     
   
  0.577
POPTR_0016s00730.1
Predicted protein (330 aa)
     
   
  0.554
POPTR_0006s00680.1
Predicted protein (328 aa)
     
   
  0.554
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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