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POPTR_0018s06240.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0018s06240.1" - tRNA in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
POPTR_0018s06240.1tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family (521 aa)    
Predicted Functional Partners:
POPTR_0018s12420.1
tRNA (adenine(58)-N(1))-methyltransferase (311 aa)
   
 
  0.890
POPTR_0002s09190.1
Uncharacterized protein (443 aa)
   
 
  0.842
POPTR_0013s15000.1
Uncharacterized protein (461 aa)
     
        0.795
POPTR_0016s00730.1
Uncharacterized protein (330 aa)
     
   
  0.761
POPTR_0006s00680.1
Uncharacterized protein (328 aa)
     
   
  0.761
POPTR_0019s08410.1
Putative tRNA (cytidine(32)/guanosine(34)-2’-O)-methyltransferase; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (316 aa)
     
   
  0.757
POPTR_0002s26220.1
Uncharacterized protein (1307 aa)
     
   
  0.751
POPTR_0005s23780.1
Uncharacterized protein (606 aa)
           
  0.741
POPTR_0002s04750.1
Uncharacterized protein (789 aa)
           
  0.741
POPTR_0017s13360.1
tRNA (guanine(26)-N(2))-dimethyltransferase (583 aa)
     
   
  0.730
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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