Groups of genes that are frequently observed in each other's genomic neighborhood.
Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein (392 aa)
Predicted Functional Partners:
Uncharacterized protein (779 aa)
Transferase family protein; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein [source-UniProtKB/TrEMBL;Acc-B9IMF9_POPTR] (455 aa)
Uncharacterized protein; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein [source-UniProtKB/TrEMBL;Acc-B9N329_POPTR] (451 aa)
Uncharacterized protein; Belongs to the protein kinase superfamily (485 aa)
Uncharacterized protein; Belongs to the peptidase S8 family (817 aa)
Subtilase family protein; Belongs to the peptidase S8 family (817 aa)
annotation not available (220 aa)
Uncharacterized protein (194 aa)
annotation not available (174 aa)
Uncharacterized protein (115 aa)
Your Current Organism:
NCBI taxonomy Id: 3694 Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar