STRINGSTRING
POPTR_0019s00300.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0019s00300.1" - Predicted protein in Populus trichocarpa
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0019s00300.1Predicted protein (650 aa)    
Predicted Functional Partners:
POPTR_0006s26980.1
Rna-dependent RNA polymerase [source-UniProtKB/TrEMBL;Acc-B9HA49_POPTR] (1198 aa)
     
 
  0.887
POPTR_0018s01670.1
Rna-dependent RNA polymerase [source-UniProtKB/TrEMBL;Acc-B9IKW9_POPTR] (1200 aa)
     
 
  0.884
POPTR_0015s08500.1
Rna-dependent RNA polymerase [source-UniProtKB/TrEMBL;Acc-B9IEP4_POPTR] (1110 aa)
     
 
  0.799
POPTR_0008s13550.1
Rna-dependent RNA polymerase [source-UniProtKB/TrEMBL;Acc-B9HJH7_POPTR] (1133 aa)
     
 
  0.775
POPTR_0018s08340.1
Hypothetical protein (1476 aa)
     
   
  0.665
POPTR_0015s05550.1
Argonaute protein group [source-UniProtKB/TrEMBL;Acc-B9N365_POPTR] (1072 aa)
     
   
  0.663
POPTR_0006s20310.1
Hypothetical protein (1327 aa)
           
  0.649
POPTR_0002s18240.1
Endoribonuclease Dicer family protein (1967 aa)
     
   
  0.646
POPTR_0008s07580.1
Dicer-like protein [source-UniProtKB/TrEMBL;Acc-B9HHX6_POPTR] (1468 aa)
     
   
  0.645
POPTR_0007s06560.1
Hypothetical protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002309992.1] (879 aa)
     
 
  0.638
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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