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POPTR_0658s00200.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0658s00200.1" - 3-ketoacyl-CoA synthase in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0658s00200.13-ketoacyl-CoA synthase (524 aa)    
Predicted Functional Partners:
POPTR_0008s18190.1
Uncharacterized protein (324 aa)
     
 
  0.779
POPTR_0010s06240.1
Short-chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (319 aa)
         
  0.768
POPTR_0010s06220.1
B-keto acyl reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (320 aa)
     
 
  0.741
POPTR_0010s06230.1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (322 aa)
         
  0.658
POPTR_0014s11590.1
annotation not available (139 aa)
           
  0.597
POPTR_0002s19720.1
BZIP transcription factor family protein (144 aa)
           
  0.597
POPTR_0007s14290.1
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long- chain fatty acids elongation cycle. This endoplasmic reticulum- bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursor [...] (221 aa)
           
  0.567
POPTR_0009s08700.1
Pathogenesis-related family protein; Belongs to the CRISP family (160 aa)
           
  0.459
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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