STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ89208.1Hypothetical protein. (513 aa)    
Predicted Functional Partners:
SFZ89209.1
Hypothetical protein.
       0.675
SFZ89211.1
Mannose-6-phosphate isomerase, cupin superfamily.
       0.639
SFZ89212.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.623
SFZ89210.1
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains.
       0.608
SFZ89213.1
23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family.
       0.554
SFZ89214.1
Hypothetical protein.
       0.554
SFZ89207.1
Hypothetical protein.
  
    0.535
queE
Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
       0.437
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.