STRINGSTRING
Strop_0483 protein (Salinispora tropica) - STRING interaction network
"Strop_0483" - annotation not available in Salinispora tropica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Strop_0483annotation not available (3754 aa)    
Predicted Functional Partners:
Strop_0484
annotation not available (505 aa)
 
          0.901
Strop_0481
Uncharacterized protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (145 aa)
 
          0.878
Strop_0476
annotation not available (253 aa)
   
          0.771
Strop_0470
annotation not available (426 aa)
   
          0.770
Strop_1942
annotation not available (285 aa)
 
          0.733
Strop_0482
annotation not available (112 aa)
              0.700
Strop_2791
PFAM- alpha/beta hydrolase fold (262 aa)
   
     
  0.678
Strop_0485
annotation not available (229 aa)
              0.668
Strop_3603
annotation not available (619 aa)
 
     
  0.659
Strop_0305
PFAM- peptidase S8 and S53, subtilisin, kexin, sedolisin; Kelch repeat-containing protein; Kelch repeat protein (1451 aa)
         
  0.652
Your Current Organism:
Salinispora tropica
NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440
Server load: low (10%) [HD]