Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplI | rplR | Strop_4553 | Strop_3907 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.991 |
| rplI | rpmB | Strop_4553 | Strop_1277 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.984 |
| rplI | rpmE | Strop_4553 | Strop_3645 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L31P; Binds the 23S rRNA. | 0.934 |
| rplI | rpmF | Strop_4553 | Strop_1285 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.964 |
| rplI | rpmG2 | Strop_4553 | Strop_3942 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.979 |
| rplI | rpmI | Strop_4553 | Strop_1883 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.976 |
| rplI | rpmJ | Strop_4553 | Strop_3899 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.977 |
| rplI | rpsF | Strop_4553 | Strop_4556 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
| rplI | rpsQ | Strop_4553 | Strop_3914 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.990 |
| rplI | rpsZ | Strop_4553 | Strop_3910 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.979 |
| rplR | rplI | Strop_3907 | Strop_4553 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.991 |
| rplR | rpmB | Strop_3907 | Strop_1277 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.983 |
| rplR | rpmE | Strop_3907 | Strop_3645 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | LSU ribosomal protein L31P; Binds the 23S rRNA. | 0.956 |
| rplR | rpmF | Strop_3907 | Strop_1285 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.967 |
| rplR | rpmG2 | Strop_3907 | Strop_3942 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.986 |
| rplR | rpmI | Strop_3907 | Strop_1883 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.987 |
| rplR | rpmJ | Strop_3907 | Strop_3899 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.993 |
| rplR | rpsF | Strop_3907 | Strop_4556 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.991 |
| rplR | rpsQ | Strop_3907 | Strop_3914 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.997 |
| rplR | rpsZ | Strop_3907 | Strop_3910 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.992 |
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