node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP52864.1 | ABP55913.1 | Strop_0379 | Strop_3482 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; Belongs to the DEAD box helicase family. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein. | 0.597 |
ABP52864.1 | pnp | Strop_0379 | Strop_1381 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.842 |
ABP52864.1 | rpoA | Strop_0379 | Strop_3895 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.712 |
ABP52864.1 | rpsO | Strop_0379 | Strop_1380 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; Belongs to the DEAD box helicase family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.621 |
ABP52864.1 | truB | Strop_0379 | Strop_1378 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; Belongs to the DEAD box helicase family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.524 |
ABP53849.1 | pnp | Strop_1382 | Strop_1381 | PFAM: peptidase M16 domain protein; Belongs to the peptidase M16 family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.874 |
ABP53849.1 | rpsO | Strop_1382 | Strop_1380 | PFAM: peptidase M16 domain protein; Belongs to the peptidase M16 family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.576 |
ABP55913.1 | ABP52864.1 | Strop_3482 | Strop_0379 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; Belongs to the DEAD box helicase family. | 0.597 |
ABP55913.1 | ABP56518.1 | Strop_3482 | Strop_4088 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | 0.597 |
ABP55913.1 | ABP56630.1 | Strop_3482 | Strop_4202 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | 0.597 |
ABP55913.1 | pnp | Strop_3482 | Strop_1381 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.960 |
ABP55913.1 | rho | Strop_3482 | Strop_3646 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.483 |
ABP56518.1 | ABP55913.1 | Strop_4088 | Strop_3482 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein. | 0.597 |
ABP56518.1 | pnp | Strop_4088 | Strop_1381 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.841 |
ABP56518.1 | rpoA | Strop_4088 | Strop_3895 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.712 |
ABP56518.1 | rpsO | Strop_4088 | Strop_1380 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.618 |
ABP56518.1 | truB | Strop_4088 | Strop_1378 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.531 |
ABP56630.1 | ABP55913.1 | Strop_4202 | Strop_3482 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein. | 0.597 |
ABP56630.1 | pnp | Strop_4202 | Strop_1381 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.843 |
ABP56630.1 | rpoA | Strop_4202 | Strop_3895 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.712 |