node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplF | rplI | Strop_3908 | Strop_4553 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.994 |
rplF | rplM | Strop_3908 | Strop_3864 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
rplF | rplS | Strop_3908 | Strop_1309 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.992 |
rplF | rplT | Strop_3908 | Strop_1884 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.991 |
rplF | rplU | Strop_3908 | Strop_3481 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
rplF | rpmA | Strop_3908 | Strop_3480 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.991 |
rplF | rpsH | Strop_3908 | Strop_3909 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
rplF | rpsI | Strop_3908 | Strop_3863 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
rplF | rpsP | Strop_3908 | Strop_1305 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.991 |
rplF | rpsT | Strop_3908 | Strop_3465 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.988 |
rplI | rplF | Strop_4553 | Strop_3908 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.994 |
rplI | rplM | Strop_4553 | Strop_3864 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.993 |
rplI | rplS | Strop_4553 | Strop_1309 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.990 |
rplI | rplT | Strop_4553 | Strop_1884 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.991 |
rplI | rplU | Strop_4553 | Strop_3481 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
rplI | rpmA | Strop_4553 | Strop_3480 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.986 |
rplI | rpsH | Strop_4553 | Strop_3909 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.988 |
rplI | rpsI | Strop_4553 | Strop_3863 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.988 |
rplI | rpsP | Strop_4553 | Strop_1305 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.988 |
rplI | rpsT | Strop_4553 | Strop_3465 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.974 |