Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP52868.1 | ABP54419.1 | Strop_0383 | Strop_1960 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | 0.426 |
ABP52868.1 | ABP54537.1 | Strop_0383 | Strop_2086 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | 0.426 |
ABP52868.1 | ABP54956.1 | Strop_0383 | Strop_2510 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | Hypothetical protein. | 0.482 |
ABP52868.1 | ABP56314.1 | Strop_0383 | Strop_3884 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1. | 0.741 |
ABP52868.1 | rplQ | Strop_0383 | Strop_3894 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | PFAM: ribosomal protein L17. | 0.478 |
ABP52868.1 | truA | Strop_0383 | Strop_3893 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.826 |
ABP52868.1 | ybeY | Strop_0383 | Strop_3452 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.777 |
ABP54419.1 | ABP52868.1 | Strop_1960 | Strop_0383 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | 0.426 |
ABP54419.1 | ABP54537.1 | Strop_1960 | Strop_2086 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | 0.977 |
ABP54419.1 | ABP54956.1 | Strop_1960 | Strop_2510 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | Hypothetical protein. | 0.428 |
ABP54419.1 | rplQ | Strop_1960 | Strop_3894 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | PFAM: ribosomal protein L17. | 0.403 |
ABP54419.1 | truA | Strop_1960 | Strop_3893 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.883 |
ABP54419.1 | ybeY | Strop_1960 | Strop_3452 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.894 |
ABP54537.1 | ABP52868.1 | Strop_2086 | Strop_0383 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | 0.426 |
ABP54537.1 | ABP54419.1 | Strop_2086 | Strop_1960 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | 0.977 |
ABP54537.1 | ABP54956.1 | Strop_2086 | Strop_2510 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | Hypothetical protein. | 0.428 |
ABP54537.1 | rplQ | Strop_2086 | Strop_3894 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | PFAM: ribosomal protein L17. | 0.403 |
ABP54537.1 | truA | Strop_2086 | Strop_3893 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | tRNA-pseudouridine synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.883 |
ABP54537.1 | ybeY | Strop_2086 | Strop_3452 | PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.894 |
ABP54956.1 | ABP52868.1 | Strop_2510 | Strop_0383 | Hypothetical protein. | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | 0.482 |
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