STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108233591Prostaglandin E receptor 4 (subtype EP4) a; Belongs to the G-protein coupled receptor 1 family. (446 aa)    
Predicted Functional Partners:
LOC108251585
Uncharacterized protein.
    
 0.583
GNAS
GNAS complex locus.
    
 0.583
LOC108231696
GNAS complex locus.
    
 0.583
gnal
Uncharacterized protein.
    
 0.583
ptger2
Prostaglandin E receptor 2a (subtype EP2).
     
0.514
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
  0.499
LOC108231344
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
  0.499
LOC108248275
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.499
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.499
LOC108235428
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
    
  0.415
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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