STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000001198Thyroglobulin type-1 domain-containing protein. (102 aa)    
Predicted Functional Partners:
hspg2
Heparan sulfate proteoglycan 2.
   
 0.739
agrn
Agrin.
   
 0.572
ENSKMAP00000027253
Uncharacterized protein.
   
 0.563
ENSKMAP00000010348
Uncharacterized protein.
   
 0.516
LOC108249226
Uncharacterized protein.
   
 0.513
lamc3
Laminin, gamma 3.
   
 0.513
Lamc1
Uncharacterized protein.
   
 0.513
ENSKMAP00000007682
Laminin, alpha 5.
   
 0.473
ENSKMAP00000017720
Uncharacterized protein.
   
 0.473
ENSKMAP00000017830
Si:ch211-241e1.3.
   
 0.473
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.