STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc2lTrafficking protein particle complex 2-like. (139 aa)    
Predicted Functional Partners:
trappc10
Trafficking protein particle complex 10.
    
 0.999
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.999
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.998
trappc2
Trafficking protein particle complex 2.
    
 0.998
trappc11
Trafficking protein particle complex 11.
    
 0.996
trappc9
Trafficking protein particle complex 9.
    
 0.996
ENSKMAP00000029725
Trafficking protein particle complex 8.
    
 0.995
trappc12
Trafficking protein particle complex 12.
    
 0.988
trappc13
Trafficking protein particle complex 13.
    
 0.982
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.