STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackr4Atypical chemokine receptor 4b; Belongs to the G-protein coupled receptor 1 family. (345 aa)    
Predicted Functional Partners:
LOC108230571
Chemokine (C-C motif) ligand 25b.
    
 0.980
LOC108232830
Atypical chemokine receptor 4a; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.903
LOC108244547
C-C motif chemokine.
   
 0.670
ENSKMAP00000005451
SCY domain-containing protein.
    
 0.627
ccl17
SCY domain-containing protein.
  
 0.523
LOC108239394
C-C motif chemokine.
  
 0.496
LOC108231810
C-C motif chemokine.
   
 0.457
LOC108241502
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.403
cxcl12
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
    
 0.403
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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