STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asic4Acid-sensing (proton-gated) ion channel family member 4a; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (547 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
      
 0.609
stoml1
Stomatin (EPB72)-like 1.
    
 0.600
prlr
Prolactin receptor; This is a receptor for the anterior pituitary hormone prolactin; Belongs to the type I cytokine receptor family. Type 1 subfamily.
      
 0.563
pth2r
Parathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family.
      
 0.491
LOC108236983
Stomatin (EPB72)-like 3b.
    
 0.455
STOML3
Stomatin (EPB72)-like 3a.
    
 0.455
stom
Stomatin.
    
 0.455
nedd4
NEDD4 E3 ubiquitin protein ligase a.
    
 0.422
LOC108249338
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a.
    
 0.422
hecw2
Uncharacterized protein.
    
 0.422
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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