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NGA3 protein (Arabidopsis thaliana) - STRING interaction network
"NGA3" - AP2/B3-like transcriptional factor family protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
NGA3AP2/B3-like transcriptional factor family protein; Regulates lateral organ growth. Functionally redundant with NGA1, NGA2 and NGA4 (358 aa)    
Predicted Functional Partners:
STY1
Lateral root primordium (LRP) protein-related; Transcription activator that binds DNA on 5’-ACTCTAC-3’ and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI- related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of [...] (370 aa)
           
  0.838
AT3G19870
AP-5 complex subunit beta-like protein; Unknown protein; Has 84 Blast hits to 64 proteins in 35 species- Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source- NCBI BLink) (1090 aa)
           
  0.808
TET13
Tetraspanin-13; May be involved in the regulation of cell differentiation (278 aa)
           
  0.695
AT2G19050
GDSL-like Lipase/Acylhydrolase superfamily protein; Its function is described as lipase activity, hydrolase activity, acting on ester bonds; Involved in lipid metabolic process; Located in endomembrane system; Expressed in sepal, male gametophyte, pollen tube; Expressed during L mature pollen stage, M germinated pollen stage, 4 anthesis; Contains the following InterPro domains- Lipase, GDSL (InterPro-IPR001087); BEST Arabidopsis thaliana protein match is- SGNH hydrolase-type esterase superfamily protein (TAIR-AT2G19060.1); Has 3204 Blast hits to 3171 proteins in 126 species- Archae - 0 [...] (349 aa)
           
  0.666
RGTA1
Geranylgeranyl transferase type-2 subunit alpha 1; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2. In vitro, can prenylate PGGTI targets with the C-terminal Cys-aliphatic- aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C-terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the alpha subunit is associated with a beta subunit (RGTB1 or RGTB2) (678 aa)
           
  0.644
TULP1
Tubby-like F-box protein 1; Member of TLP family (455 aa)
           
  0.641
YUC4
Probable indole-3-pyruvate monooxygenase YUCCA4; Involved in auxin biosynthesis. Both isoforms are catalitically active. Involved during embryogenesis and seedling development. Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots (411 aa)
           
  0.623
YUC2
Flavin-binding monooxygenase family protein; Involved in auxin biosynthesis. Converts the indole-3- pyruvic acid (IPA) produced by the TAA family to indole-3-acetic acid (IAA). Unable to use tryptamine (TAM) as substrate. Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots (415 aa)
           
  0.619
SHI
Lateral root primordium (LRP) protein-related; Transcription activator that binds DNA on 5’-ACTCTAC-3’ and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI- related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of [...] (331 aa)
           
  0.615
ProT3
Proline transporter 3; Proline transporter that mediates proline and glycine betaine transport. When expressed in a heterologous system (yeast), imports L-proline, glycine betaine and GABA across the plasma membrane (436 aa)
     
   
  0.585
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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