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UMAMIT28 protein (Arabidopsis thaliana) - STRING interaction network
"UMAMIT28" - Nodulin MtN21-like transporter family protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMAMIT28Nodulin MtN21-like transporter family protein (365 aa)    
Predicted Functional Partners:
DUF6
Uncharacterized protein (709 aa)
           
  0.670
TED6
Tracheary element differentiation-related 6 (116 aa)
           
  0.609
AT2G28510
Dof zinc finger protein DOF2.1; Transcription factor that binds specifically to a 5’- AA[AG]G-3’ consensus core sequence (288 aa)
           
  0.605
AGL56
Root Specific (201 aa)
           
  0.600
PRMT3
Protein arginine methyltransferase 3; Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins (601 aa)
           
  0.559
AT1G68810
Transcription factor bHLH30 (368 aa)
           
  0.559
AT4G29100
Transcription factor bHLH68 (407 aa)
           
  0.552
AGL26
Root Specific (368 aa)
           
  0.551
PRR1
Pinoresinol reductase 1; Reductase involved in lignan biosynthesis. Unlike conventional pinoresinol reductases that can reduce both pinoresinol and lariciresinol, PRR1 shows a strict substrate preference toward pinoresinol. Active on both (+) and (-)- pinoresinol. Abstracts the 4R-hydride from the NADPH cofactor during catalysis (317 aa)
           
  0.474
NAC101
NAC-domain protein 101; Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5’- (T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3’, and to the tracheary elements (TE) specific regulating cis-element (TERE), 5’-CTTNAAAGCNA-3’, in the promoter of target genes (e.g. genes involved in secondary wall biosynthesis, cell wall modification such as xylan accumulation, and programmed cell death) (PubMed-20935069, PubMed-20952636, PubMed-20488898). Involved in xylem formation in roots and shoots, especially regulating metaxylem vessel differentiation by promoting [...] (348 aa)
           
  0.471
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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