• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
IQD18 protein (Arabidopsis thaliana) - STRING interaction network
"IQD18" - IQ-domain 18 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQD18IQ-domain 18 (IQD18); Its function is described as molecular_function unknown; Expressed in 10 plant structures; Expressed during 6 growth stages; Contains the following InterPro domains- IQ calmodulin-binding region (InterPro-IPR000048); BEST Arabidopsis thaliana protein match is- IQ-domain 17 (TAIR-AT4G00820.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (527 aa)    
Predicted Functional Partners:
iqd33
Uncharacterized protein At5g35670; IQ-domain 33 (iqd33); Contains the following InterPro domains- IQ calmodulin-binding region (InterPro-IPR000048); BEST Arabidopsis thaliana protein match is- IQ-domain 3 (TAIR-AT3G52290.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (442 aa)
           
  0.836
MDP40
At1g23060/T26J12_16; BEST Arabidopsis thaliana protein match is- TPX2 (targeting protein for Xklp2) protein family (TAIR-AT1G70950.1); Has 449 Blast hits to 419 proteins in 98 species- Archae - 0; Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158; Viruses - 3; Other Eukaryotes - 88 (source- NCBI BLink) (367 aa)
           
  0.831
IQD28
Uncharacterized protein At1g14380/F14L17_12; IQ-domain 28 (IQD28); Its function is described as calmodulin binding; Involved in biological_process unknown; Located in plasma membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- IQ calmodulin-binding region (InterPro-IPR000048); BEST Arabidopsis thaliana protein match is- IQ-domain 29 (TAIR-AT2G02790.1); Has 6802 Blast hits to 5296 proteins in 468 species- Archae - 2; Bacteria - 474; Metazoa - 2682; Fungi - 509; Plants - 1003; Viruses - 37; Other Eukaryotes - 2095 (source [...] (664 aa)
           
0.413
IQD29
IQ-domain 29 (IQD29); Its function is described as calmodulin binding; Involved in biological_process unknown; Located in plasma membrane; Contains the following InterPro domains- IQ calmodulin-binding region (InterPro-IPR000048); BEST Arabidopsis thaliana protein match is- IQ-domain 28 (TAIR-AT1G14380.2); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (636 aa)
           
0.407
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]