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IQD18 protein (Arabidopsis thaliana) - STRING interaction network
"IQD18" - IQ-domain 18 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQD18IQ-domain 18 (527 aa)    
Predicted Functional Partners:
AT3G19184
AP2/B3 domain-containing transcription factor (277 aa)
     
   
  0.678
AT1G68780
RNI-like superfamily protein (432 aa)
           
  0.638
AT5G17080
Cathepsin-related protein (298 aa)
           
  0.631
iqd33
IQ-domain 33 (442 aa)
     
   
  0.614
REM22
REPRODUCTIVE MERISTEM 22 (302 aa)
           
  0.601
AT3G53310
B3 domain-containing protein REM20 (286 aa)
           
  0.600
At4g24150
Growth-regulating factor 8; Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation (493 aa)
           
  0.559
At2g36400
Growth-regulating factor 3; Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation. microRNA396-GRF1/GRF3 regulatory module acts as a developmental regulator in the reprogramming of root cells during cyst nematode infection, leading to the formation of the syncytium (398 aa)
           
  0.557
SLK2
SEUSS-like 2; Probable transcription regulator that functions in the development of the carpel margin meristem similarly to SEUSS (SEU). In association with SEU, supports organ development from meristematic regions by facilitating auxin response and thus organ initiation, and by sustaining meristematic potential through the maintenance of PHABULOSA expression (PubMed-20007451). DNA-binding adapter subunit of the SEU-SLK2 transcriptional corepressor of abiotic stress (e.g. salt and osmotic stress) response genes (PubMed-24564815) (816 aa)
           
  0.551
AT5G57720
AP2/B3 domain-containing protein (300 aa)
           
  0.551
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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