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STRINGSTRING
AT1G01170 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G01170" - Protein of unknown function in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G01170Protein of unknown function (DUF1138); Its function is described as molecular_function unknown; Involved in response to stress; Located in mitochondrion, membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein of unknown function DUF1138 (InterPro-IPR009515); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF1138) (TAIR-AT4G00860.1); Has 86 Blast hits to 86 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source- NCBI [...] (83 aa)    
Predicted Functional Partners:
Tic20-II
Uncharacterised conserved protein ycf60; May be involved in protein precursor import into chloroplasts. Not redundant with TIC20-I, TIC20-IV or TIC20-V; Belongs to the Tic20 family (208 aa)
           
  0.951
AT3G51660
Putative macrophage migration inhibitory factor (MIF); Tautomerase/MIF superfamily protein; Its function is described as molecular_function unknown; Involved in inflammatory response, response to other organism; Located in peroxisome; Expressed in 20 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Tautomerase (InterPro-IPR014347), Macrophage migration inhibitory factor (InterPro-IPR001398); BEST Arabidopsis thaliana protein match is- Tautomerase/MIF superfamily protein (TAIR-AT5G01650.1); Has 396 Blast hits to 396 proteins in 86 species- Ar [...] (112 aa)
           
  0.928
AT3G08740
Elongation factor P (EF-P) family protein; Its function is described as translation elongation factor activity; Involved in translational elongation; Located in chloroplast, chloroplast stroma; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Translation elongation factor P (InterPro-IPR011768), Translation elongation factor P/YeiP, conserved site (InterPro-IPR013852), Nucleic acid-binding, OB-fold (InterPro-IPR012340), Translation elongation factor, KOW-like (InterPro-IPR013185), Translation protein SH3-like, subgroup (Inter [...] (236 aa)
     
   
  0.641
RH20
DEA(D/H)-box RNA helicase family protein; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing; Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily (501 aa)
           
  0.639
COP13
Proteasome component (PCI) domain protein; Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1- containing Ubl ligase complexes. The complex is [...] (429 aa)
           
  0.636
AT3G18180
Glycosyltransferase family 61 protein; Its function is described as transferase activity, transferring glycosyl groups; Involved in biological_process unknown; Located in cellular_component unknown; Contains the following InterPro domains- Glycosyltransferase AER61, uncharacterised (InterPro-IPR007657); BEST Arabidopsis thaliana protein match is- Glycosyltransferase family 61 protein (TAIR-AT3G18170.1); Has 763 Blast hits to 763 proteins in 164 species- Archae - 0; Bacteria - 23; Metazoa - 306; Fungi - 8; Plants - 399; Viruses - 0; Other Eukaryotes - 27 (source- NCBI BLink) (470 aa)
           
  0.576
AT3G18170
Glycosyltransferase family 61 protein; Its function is described as transferase activity, transferring glycosyl groups; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 8 plant structures; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- Glycosyltransferase AER61, uncharacterised (InterPro-IPR007657); BEST Arabidopsis thaliana protein match is- Glycosyltransferase family 61 protein (TAIR-AT3G18180.1); Has 763 Blast hits to 762 proteins in 161 species- Archae - 0; Bacteria - 43; Metazoa - 286; [...] (384 aa)
           
  0.576
AT5G01650
Tautomerase/MIF superfamily protein; Its function is described as molecular_function unknown; Involved in inflammatory response, response to other organism; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Tautomerase (InterPro-IPR014347), Macrophage migration inhibitory factor (InterPro-IPR001398); BEST Arabidopsis thaliana protein match is- Tautomerase/MIF superfamily protein (TAIR-AT5G57170.2); Has 820 Blast hits to 820 proteins in 207 species- Archae - 0; Bacteria - 141; Metazoa - 384; Fungi - 26; Plants - 141; Viruses - [...] (122 aa)
     
   
  0.568
AT5G57170
Tautomerase/MIF superfamily protein; Involved in inflammatory response, response to other organism; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Tautomerase (InterPro-IPR014347), Macrophage migration inhibitory factor (InterPro-IPR001398); BEST Arabidopsis thaliana protein match is- Tautomerase/MIF superfamily protein (TAIR-AT5G01650.2) (116 aa)
     
   
  0.556
AT2G47780
Rubber elongation factor protein (REF); Contains the following InterPro domains- Rubber elongation factor (InterPro-IPR008802); BEST Arabidopsis thaliana protein match is- Rubber elongation factor protein (REF) (TAIR-AT3G05500.1); Has 126 Blast hits to 126 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink); Belongs to the REF/SRPP family (235 aa)
           
  0.534
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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