STRINGSTRING
CYP78A8 protein (Arabidopsis thaliana) - STRING interaction network
"CYP78A8" - Member of CYP78A in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP78A8Member of CYP78A (535 aa)    
Predicted Functional Partners:
AT5G14120
Major facilitator protein (579 aa)
           
  0.861
AT1G66020
Terpene cyclase, C1 domain-containing protein (598 aa)
     
   
  0.848
AT3G29410
Terpene cyclase class C1 domain-containing protein (603 aa)
     
   
  0.677
AT5G23870
Pectinacetylesterase family protein; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (451 aa)
           
  0.670
AT1G33750
Terpene cyclase, C1 domain-containing protein (603 aa)
           
  0.670
AAE5
Acyl activating enzyme 5; May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs (552 aa)
   
 
  0.649
AT1G31950
Terpene cyclase, C1 domain-containing protein (606 aa)
           
  0.636
AT3G32030
Terpene cyclase, C1 domain-containing protein (604 aa)
           
  0.631
RALFL34
Ralf-like 34; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity) (129 aa)
           
  0.604
AT5G63380
4-coumarate--CoA ligase-like 9; Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors. Converts 12-oxo-phytodienoic acid (OPDA) into OPDA-CoA (562 aa)
   
 
  0.580
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]