STRINGSTRING
AT1G01240 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G01240" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G01240Uncharacterized protein (331 aa)    
Predicted Functional Partners:
AT1G15740
Leucine-rich repeat family protein (585 aa)
     
        0.653
AT1G19660
Wound-responsive family protein; Bifunctional nuclease with both RNase and DNase activities. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen (By similarity) (329 aa)
     
        0.514
J8
Chaperone protein dnaJ 8; Have a continuous role in plant development probably in the structural organization of compartments (163 aa)
     
        0.491
At1g54130
RELA/SPOT homolog 3; Possesses ppGpp (guanosine 3’-diphosphate 5’- diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. May be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses (715 aa)
     
        0.440
AT5G18630
alpha/beta-Hydrolases superfamily protein (358 aa)
     
        0.410
AT3G03870
Uncharacterized protein (266 aa)
     
        0.408
PLPB
PAS/LOV protein B (399 aa)
     
        0.407
UBC5
Ubiquitin-conjugating enzyme 5; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (185 aa)
     
        0.404
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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