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AT1G01630 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G01630" - Sec14p-like phosphatidylinositol transfer family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G01630Sec14p-like phosphatidylinositol transfer family protein; Contains the following InterPro domains- Cellular retinaldehyde-binding/triple function, C-terminal (InterPro-IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro-IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro-IPR011074); BEST Arabidopsis thaliana protein match is- Sec14p-like phosphatidylinositol transfer family protein (TAIR-AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species- Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0 [...] (255 aa)    
Predicted Functional Partners:
AT5G22310
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G11590.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (481 aa)
       
      0.762
AT4G32190
Myosin heavy chain-related protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (783 aa)
       
      0.762
AT4G15730
Uncharacterized protein At4g15730/dl3905c; CW-type Zinc Finger; Its function is described as zinc ion binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 10 plant structures; Expressed during LP.06 six leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Contains the following InterPro domains- Zinc finger, CW-type (InterPro-IPR011124); BEST Arabidopsis thaliana protein match is- CW-type Zinc Finger (TAIR-AT3G62900.1); Has 395 Blast hits to 319 proteins in 66 species- Archae - 0; Bacte [...] (1059 aa)
       
      0.762
AT3G11590
Uncharacterized protein F24K9.26; Unknown protein; Located in plasma membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species- Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source- NCBI BLink) (622 aa)
       
      0.762
HUB1
E3 ubiquitin-protein ligase BRE1-like 1; E3 ubiquitin-protein ligase that monoubiquitinates H2B to form H2BK143ub1. H2BK143ub1 gives a specific tag for epigenetic transcriptional activation and is also prerequisite for H3K4me and maybe H3K79me. It thereby plays a central role in histone code and gene regulation. Forms a ubiquitin ligase complex in cooperation with the E2 enzyme UBC2/RAD6. Required for the regulation of flowering time and defense against necrotrophic fungal pathogens. Involved in the control of seed dormancy and germination; Belongs to the BRE1 family (878 aa)
       
      0.762
AT1G30860
Uncharacterized protein At1g30860; RING/U-box superfamily protein; Its function is described as zinc ion binding; Expressed in stem, stamen, pollen tube; Expressed during 4 anthesis; Contains the following InterPro domains- Zinc finger, RING-type (InterPro-IPR001841); BEST Arabidopsis thaliana protein match is- RING/U-box superfamily protein (TAIR-AT2G34920.1); Has 4912 Blast hits to 4241 proteins in 362 species- Archae - 9; Bacteria - 172; Metazoa - 2090; Fungi - 292; Plants - 512; Viruses - 97; Other Eukaryotes - 1740 (source- NCBI BLink) (730 aa)
       
      0.762
IAA27
Phytochrome-associated protein 2; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression (305 aa)
           
  0.733
TSBtype2
Tryptophan synthase beta type 2 (TSBtype2); Its function is described as pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity; Involved in tryptophan biosynthetic process, metabolic process; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro-IPR001926), Tryptophan synthase, beta chain-like (InterPro-IPR006316); BEST Arabidopsis thaliana protein match is- tryptophan synthase beta-subunit 2 (TAIR-AT4G27070.1); Has 1807 Blast hits to 1807 protein [...] (506 aa)
     
   
  0.710
AT5G58490
NAD(P)-binding Rossmann-fold superfamily protein; Its function is described as coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; Involved in lignin biosynthetic process, cellular metabolic process, metabolic process; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- NAD-dependent epimerase/dehydratase (InterPro-IPR001509), NAD(P)-binding domain (InterPro-IPR016040); BEST Arabidopsis thaliana protein match is- NAD(P)-binding Rossmann-fold superfamily protein [...] (324 aa)
           
  0.634
PMSR1
Peptide methionine sulfoxide reductase A1; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRA family specifically reduces the MetSO S-enantiomer (By similarity) (202 aa)
           
  0.565
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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