STRINGSTRING
AT1G01920 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G01920" - SET domain-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G01920SET domain-containing protein (572 aa)    
Predicted Functional Partners:
MAP1B
Methionine aminopeptidase 1C; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (344 aa)
           
  0.924
AT1G24610
Rubisco methyltransferase-like protein (476 aa)
           
  0.910
MAP1D
Methionine aminopeptidase 1D; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (350 aa)
           
  0.861
MAP1C
Methionine aminopeptidase 1B; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (369 aa)
           
  0.808
HAG5
MYST-like histone acetyltransferase 2; Histone acetyltransferase which may be involved in transcriptional activation. Acetylates ’Lys-5’ of histone H4 (H4K5ac) (PubMed-16648464, PubMed-17877703). Essential for gametophyte development (PubMed-19040736). Negative regulator of flowering controlling the H4K5ac levels in the FLC chromatin (PubMed-23273925) (445 aa)
     
   
  0.778
AT5G42390
Stromal processing peptidase; Cleaves presequences (transit peptides) from chloroplastic protein precursors (PubMed-12795700). Initially recognizes a precursor by binding to the C-terminus of its transit peptide and then removes the transit peptide in a single endoproteolytic step. In a next step, pursues the cleavage of transit peptide to a subfragment form (By similarity) (1265 aa)
           
  0.670
PDF1B
Peptide deformylase 1B; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Has a preferred substrate specificity towards the photosystem II (PS II) D1 polypeptide (273 aa)
           
  0.670
PDF1A
Peptide deformylase 1A; Removes the formyl group from the N-terminal Met of newly synthesized proteins (269 aa)
           
  0.603
DRM2
Domains rearranged methyltransferase 2; Involved in de novo DNA methylation. Controls asymmetric and CpNpG methylation. Required for FWA gene silencing but not for the maintenance of SUP gene silencing. Functionally redundant to CMT3 to maintain non-CpG methylation. Involved in RNA-directed DNA methylation (626 aa)
           
  0.472
AT1G07615
GTP-binding protein Obg/CgtA; May bind GTP and have GTPase activity (493 aa)
     
        0.435
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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