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STRINGSTRING
AT1G01920 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G01920" - SET domain-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G01920SET domain-containing protein; BEST Arabidopsis thaliana protein match is- Rubisco methyltransferase family protein (TAIR-AT1G14030.1); Has 611 Blast hits to 608 proteins in 165 species- Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 239; Plants - 164; Viruses - 0; Other Eukaryotes - 65 (source- NCBI BLink) (572 aa)    
Predicted Functional Partners:
AT3G55080
SET domain-containing protein; Contains the following InterPro domains- SET domain (InterPro-IPR001214); BEST Arabidopsis thaliana protein match is- Rubisco methyltransferase family protein (TAIR-AT3G07670.1); Has 1136 Blast hits to 1133 proteins in 187 species- Archae - 0; Bacteria - 0; Metazoa - 243; Fungi - 329; Plants - 401; Viruses - 0; Other Eukaryotes - 163 (source- NCBI BLink) (463 aa)
       
 
  0.556
AR401
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha (358 aa)
           
  0.555
AT5G65860
Ankyrin repeat family protein; Its function is described as methyltransferase activity; Involved in metabolic process; Located in endomembrane system; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ankyrin repeat-containing domain (InterPro-IPR020683), Arginine N-methyltransferase 2 (InterPro-IPR017408), Methyltransferase type 11 (InterPro-IPR013216), Ankyrin repeat (InterPro-IPR002110); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses [...] (346 aa)
     
   
  0.503
AT5G64150
RNA methyltransferase family protein; Its function is described as protein methyltransferase activity, methyltransferase activity, catalytic activity, nucleic acid binding; Involved in methylation, protein amino acid methylation; Located in chloroplast; Expressed in 18 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Methyltransferase small (InterPro-IPR007848), DNA methylase, N-6 adenine-specific, conserved site (InterPro-IPR002052), Modification methylase HemK (InterPro-IPR004556); Has 1807 Blast hits to 1807 proteins in 277 species- Archa [...] (377 aa)
           
  0.482
AT4G16710
Glycosyltransferase family protein 28; Its function is described as transferase activity, transferring hexosyl groups, carbohydrate binding, transferase activity, transferring glycosyl groups; Involved in lipid glycosylation, biosynthetic process, carbohydrate metabolic process; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Glycosyl transferase, family 28, C-terminal (InterPro-IPR007235); Has 641 Blast hits to 636 proteins in 314 species- Archae - 10; Bacteria - 242; Metazoa - 125; Fu [...] (176 aa)
           
  0.452
AT3G13440
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Its function is described as methyltransferase activity, nucleic acid binding; Involved in methylation, acetate biosynthetic process from carbon monoxide, methanol oxidation; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Methyltransferase small (InterPro-IPR007848), DNA methylase, N-6 adenine-specific, conserved site (InterPro-IPR002052); Has 2452 Blast hits to 2450 proteins in 945 species- Archae - 168; Bacteri [...] (278 aa)
           
  0.440
AT3G58470
Protein-lysine N-methyltransferase At3g58470; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha (248 aa)
           
  0.414
AT5G63290
Oxygen-independent coproporphyrinogen-like protein; Radical SAM superfamily protein; Its function is described as oxidoreductase activity, iron-sulfur cluster binding, coproporphyrinogen oxidase activity, catalytic activity; Involved in oxidation reduction, porphyrin biosynthetic process; Located in chloroplast, cytoplasm; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Elongator protein 3/MiaB/NifB (InterPro-IPR006638), Putative oxygen-independent coproporphyrinogen III oxidase (InterPro-IPR004559), HemN, C-terminal (InterP [...] (484 aa)
           
  0.414
AT4G27340
tRNA (guanine(37)-N1)-methyltransferase 2; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family (619 aa)
     
   
  0.407
AT1G16650
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Has 486 Blast hits to 429 proteins in 154 species- Archae - 0; Bacteria - 55; Metazoa - 267; Fungi - 96; Plants - 28; Viruses - 0; Other Eukaryotes - 40 (source- NCBI BLink) (521 aa)
           
  0.400
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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