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AT1G01970 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G01970" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G01970Pentatricopeptide repeat-containing protein (409 aa)    
Predicted Functional Partners:
CYCD3;2
CYCLIN D3;2 (367 aa)
       
      0.878
AT5G55580
Mitochondrial transcription termination factor family protein; Transcription termination factor required for processing and steady-state levels of plastid transcripts. May play a role in response to abiotic stresses (496 aa)
     
 
  0.690
AT1G05140
Peptidase M50-like protein; Metalloprotease essential for chloroplast and plant development. May be involved in regulated intramembrane proteolysis (RIP) (441 aa)
     
   
  0.664
AT3G06980
DEAD-box ATP-dependent RNA helicase 50; Probably involved in resistance to biotic and abiotic stresses (781 aa)
     
        0.649
AT1G01080
RNA recognition motif-containing protein (294 aa)
     
 
  0.644
AT2G17033
Pentatricopeptide repeat-containing protein (505 aa)
     
   
  0.640
AT2G35410
RNA-binding (RRM/RBD/RNP motifs) family protein (308 aa)
     
 
  0.637
AT1G74070
Cyclophilin-like peptidyl-prolyl cis-trans isomerase-like protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity) (317 aa)
     
   
  0.625
CRR21
Chlororespiratory reduction 21; Plays a major role in chloroplast RNA editing. Acts as a site-recognition transacting factor involved in the edition of the site 2 of ndhD (ndhD-2), which encodes a subunit of the NDH complex (830 aa)
     
   
  0.607
BSM
BELAYA SMERT; Transcription termination factor required for processing and steady-state levels of plastid transcripts. Required for splicing of the chloroplastic Clp protease (ClpP) group IIa intron. Required for maturation of 16S rRNA and 23S rRNA in the chloroplast. Essential for embryogenesis (PubMed-21464319). Required for the maintenance of the correct levels of transcripts in the mitochondria and chloroplasts (541 aa)
     
 
  0.602
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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