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ATSEC1A protein (Arabidopsis thaliana) - STRING interaction network
"ATSEC1A" - Member of Reticuline oxidase-like family in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATSEC1AMember of Reticuline oxidase-like family (541 aa)    
Predicted Functional Partners:
SEC1B
Protein transport sec1b; Involved in the vesicle trafficking. Binds syntaxins (By similarity) (662 aa)
           
  0.956
AT4G37950
Rhamnogalacturonate lyase family protein (678 aa)
           
  0.877
SEC1A
Secretory 1A; Involved in the vesicle trafficking. Binds syntaxins (By similarity) (673 aa)
           
  0.862
AT4G18180
Pectin lyase-like superfamily protein (414 aa)
           
  0.809
ALAAT2
Alanine aminotransferase 2 (553 aa)
   
  0.744
SYP131
Syntaxin 1B/2/3; Vesicle trafficking protein that functions in the secretory pathway (306 aa)
     
   
  0.736
AT1G74010
Strictosidine synthase (325 aa)
     
 
  0.730
AT2G33160
Glycosyl hydrolase and polygalacturonase domain-containing protein (664 aa)
           
  0.672
SS12
Strictosidine synthase 3; Catalyzes the stereospecific condensation of tryptamine with secologanin to form strictosidine, the key intermediate of indole alkaloid biosynthesis (329 aa)
     
 
  0.661
AT4G25980
Peroxidase 43; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue (371 aa)
           
  0.602
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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