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RA-5 protein (Arabidopsis thaliana) - STRING interaction network
"RA-5" - RAS 5 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RA-5RAS 5; Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER) (203 aa)    
Predicted Functional Partners:
AT5G54750
Transport protein particle (TRAPP) component (199 aa)
     
  0.994
AT1G51160
SNARE-like protein (169 aa)
     
  0.989
AT5G02280
SNARE-like superfamily protein (141 aa)
     
  0.981
GDI1
Guanosine nucleotide diphosphate dissociation inhibitor 1; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP (445 aa)
     
 
  0.975
AT5G58030
Transport protein particle (TRAPP) component (195 aa)
       
  0.975
GC6
Golgin candidate 6; Golgi matrix protein playing a role in tethering of vesicles to Golgi membranes and in maintaining the overall structure of the Golgi apparatus. Functions in the anterograde transport of storage protein precursors from the endoplasmic reticulum (ER) to the Golgi complex (914 aa)
     
  0.974
SYP32
Syntaxin-32; Vesicle trafficking protein that functions in the secretory pathway (361 aa)
     
  0.974
GDI2
RAB GDP DISSOCIATION INHIBITOR 2; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP (444 aa)
     
 
  0.970
SYP31
Syntaxin-31; Vesicle trafficking protein that functions in the secretory pathway (336 aa)
     
  0.970
ERD2A
ER lumen protein retaining receptor; Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes H-D-E-L (215 aa)
       
  0.963
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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