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NAC003 protein (Arabidopsis thaliana) - STRING interaction network
"NAC003" - NAC domain containing protein 3 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAC003NAC domain containing protein 3 (394 aa)    
Predicted Functional Partners:
NTL
NTF2-like (132 aa)
           
  0.559
VOZ2
Vascular plant one zinc finger protein 2; Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ1 to promote flowering downstream of phytochrome B (phyB). Down- regulates ’FLOWERING LOCUS C’ (FLC) and up-regulates ’FLOWERING LOCUS T’ (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Binds as a dimer to the palindromic sequence 5’- GCGTNNNNNNNACGC-3’. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner (450 aa)
           
  0.495
AT1G17545
Protein phosphatase 2C family protein (179 aa)
           
  0.475
UBC30
Ubiquitin-conjugating enzyme 30; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (148 aa)
           
  0.450
BBD1
Bifunctional nuclease in basal defense response 1; Bifunctional nuclease with both RNase and DNase activities. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen (325 aa)
           
  0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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