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AT1G02470 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G02470" - Polyketide cyclase/dehydrase and lipid transport superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G02470Polyketide cyclase/dehydrase and lipid transport superfamily protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Expressed in 10 plant structures; Expressed during 4 anthesis, C globular stage, petal differentiation and expansion stage; Contains the following InterPro domains- Streptomyces cyclase/dehydrase (InterPro-IPR005031); BEST Arabidopsis thaliana protein match is- Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR-AT1G02475.1); Has 390 Blast hits to 390 proteins in 132 species- [...] (221 aa)    
Predicted Functional Partners:
AT1G29530
At1g29530; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G34310.3); Has 84 Blast hits to 78 proteins in 24 species- Archae - 2; Bacteria - 4; Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 6 (source- NCBI BLink) (236 aa)
           
  0.787
AT1G29520
Plasma membrane associated protein, putative; AWPM-19-like family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system, membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- AWPM-19-like (InterPro-IPR008390); BEST Arabidopsis thaliana protein match is- AWPM-19-like family protein (TAIR-AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryot [...] (158 aa)
           
  0.787
AT1G55800
Contains the following InterPro domains- Domain of unknown function DUF2431 (InterPro-IPR019446); BEST Arabidopsis thaliana protein match is- Domain of unknown function (DUF2431) (TAIR-AT1G55790.1); Has 225 Blast hits to 224 proteins in 67 species- Archae - 0; Bacteria - 2; Metazoa - 45; Fungi - 38; Plants - 124; Viruses - 0; Other Eukaryotes - 16 (source- NCBI BLink) (314 aa)
           
  0.772
AT5G10690
Pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein; Involved in biological_process unknown; Located in chloroplast; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885), Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- Pentatricopeptide repeat (PPR) superfamily protein (TAIR-AT1G12775.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; P [...] (580 aa)
           
  0.740
CPuORF18
Upstream open reading frames (uORFs) are small open reading frames found in the 5’ UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF18 represents a conserved upstream opening reading frame relative to major ORF AT3G59050.1 (68 aa)
           
  0.740
CPuORF17
Upstream open reading frames (uORFs) are small open reading frames found in the 5’ UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF17 represents a conserved upstream opening reading frame relative to major ORF AT2G43020.1 (55 aa)
           
  0.740
FPA
Flowering time control protein FPA; Plays a role in the regulation of flowering time in the autonomous flowering pathway by decreasing FLOWERING LOCUS C mRNA levels. Required for RNA-mediated chromatin silencing of a range of loci in the genome. Cotranscriptionally recognizes aberrant RNA and marks it for silencing. Controls alternative cleavage and polyadenylation on pre-mRNAs and antisense RNAs. Acts redundantly with FCA to prevent the expression of distally polyadenylated antisense RNAs at the FLC locus; Belongs to the RRM Spen family (901 aa)
           
  0.693
AT1G51402
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (60 aa)
           
  0.642
PCFS4
Polyadenylation and cleavage factor homolog 4; Promotes flowering by suppressing FLC-mediated inhibition of flowering through the regulation of FCA pre-mRNA alternative processing. Regulates mRNA maturation including alternative polyadenylation, splicing or transcription initiation of stress-associated genes (808 aa)
           
  0.613
AT1G55805
Protein BOLA1, chloroplastic; May act either alone or in interaction with glutaredoxin as a redox-regulated transcriptional regulator, or as a factor regulating Fe-S cluster biogenesis (Probable). The glutaredoxin- BOLA1 heterodimers bind a labile, oxygen sensitive iron-sulfur cluster; Belongs to the bolA/yrbA family (160 aa)
           
  0.551
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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