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AT1G02470 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G02470" - SRPBCC ligand-binding domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G02470SRPBCC ligand-binding domain-containing protein (221 aa)    
Predicted Functional Partners:
CPuORF17
Uncharacterized protein (55 aa)
     
   
  0.737
AT5G45690
Uncharacterized protein (247 aa)
           
  0.735
AT3G47250
Uncharacterized protein (480 aa)
           
  0.735
MEE59
Maternal effect embryo arrest 59 (173 aa)
           
  0.732
CPuORF18
Conserved peptide upstream open reading frame 18 (68 aa)
           
  0.731
AT3G06690
acyl-CoA dehydrogenase domain-containing protein (187 aa)
           
  0.731
AT2G32340
TraB family protein (360 aa)
           
  0.731
AT1G74875
Uncharacterized protein (243 aa)
           
  0.731
AT1G29530
Uncharacterized protein (236 aa)
           
  0.731
AT1G29520
AWPM19-like protein (158 aa)
           
  0.731
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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