Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Beta-glucosidase; May be involved in remodeling of xylans during vascular development (768 aa)
Predicted Functional Partners:
ABC1 family protein (1040 aa)
Endoglucanase 6 (620 aa)
Polygalacturonase (456 aa)
Purple acid phosphatase 4 (339 aa)
Chitinase-like protein 2; No chitinase activity (By similarity). Required for proper cell wall biosynthesis in etiolated seedlings. Prevents lignin accumulation in hypocotyls (348 aa)
Uncharacterized protein; Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity) (336 aa)
Ubiquitin-conjugating enzyme family protein (362 aa)
Putative leucine-rich repeat transmembrane protein kinase (890 aa)
Glycosyl hydrolase family 10 protein (562 aa)
Glycosyl hydrolase family 10 protein (277 aa)
Your Current Organism:
NCBI taxonomy Id: 3702 Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress