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emb2386 protein (Arabidopsis thaliana) - STRING interaction network
"emb2386" - Ribosomal protein L19e family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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emb2386Ribosomal protein L19e family protein; Embryo defective 2386 (emb2386); Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis, embryo development ending in seed dormancy; Located in 6 components; Expressed in 25 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Ribosomal protein L19/L19e (InterPro-IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro-IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro-IPR015972); BEST Arabidopsis thaliana protein match is- Ribosomal protein L [...] (214 aa)    
Predicted Functional Partners:
EMB2207
Encodes a cytoplasmic ribosomal protein; Belongs to the universal ribosomal protein uL3 family (389 aa)
 
  0.999
AT5G20290
Ribosomal protein S8e family protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in 8 components; Expressed in 26 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Ribosomal protein S8e (InterPro-IPR001047), Ribosomal protein S8e, conserved site (InterPro-IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro-IPR022309); BEST Arabidopsis thaliana protein match is- Ribosomal protein S8e family protein (TAIR-AT5G59240.1); Has 1084 Blast hits to 1080 prot [...] (222 aa)
     
  0.999
EMB1080
Nucleic acid-binding, OB-fold-like protein; Embryo defective 1080 (EMB1080); Its function is described as structural constituent of ribosome; Involved in translation, embryo development ending in seed dormancy; Located in cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Nucleic acid-binding, OB-fold-like (InterPro-IPR016027), Nucleic acid-binding, OB-fold (InterPro-IPR012340), Ribosomal protein S17, archaeal (InterPro-IPR019978), Ribosomal protein S17 [...] (160 aa)
 
  0.999
EMB3010
40S ribosomal protein S6-2; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (249 aa)
   
  0.999
RPL5A
60S ribosomal protein L5-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl- transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...] (301 aa)
   
  0.999
AT5G02870
Ribosomal protein L4/L1 family; Its function is described as structural constituent of ribosome; Involved in translation; Located in 8 components; Expressed in 26 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein L4/L1e (InterPro-IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro-IPR013000); BEST Arabidopsis thaliana protein match is- Ribosomal protein L4/L1 family (TAIR-AT3G09630.1); Has 1138 Blast hits to 1137 proteins in 402 species- Archae - 316; Bacteria - 12; Metazoa - 270; Fungi - 177; [...] (407 aa)
   
  0.999
AT4G16720
Ribosomal protein L23/L15e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L15e (InterPro-IPR000439), Ribosomal protein L23/L15e, core (InterPro-IPR012678), Ribosomal protein L15e, conserved site (InterPro-IPR020925); BEST Arabidopsis thaliana protein match is- Ribosomal protein L23/L15e family protein (TAIR-AT4 [...] (204 aa)
   
  0.999
AT4G30800
Nucleic acid-binding, OB-fold-like protein; Contains the following InterPro domains- Nucleic acid-binding, OB-fold-like (InterPro-IPR016027), Nucleic acid-binding, OB-fold (InterPro-IPR012340), Ribosomal protein S17, archaeal (InterPro-IPR019978), Ribosomal protein S17, conserved site (InterPro-IPR019979), Ribosomal protein S17 (InterPro-IPR000266); BEST Arabidopsis thaliana protein match is- ribosomal protein S11-beta (TAIR-AT5G23740.1); Has 1377 Blast hits to 1375 proteins in 498 species- Archae - 239; Bacteria - 304; Metazoa - 305; Fungi - 147; Plants - 148; Viruses - 0; Other Eukar [...] (159 aa)
 
  0.999
AT2G19730
Ribosomal L28e protein family; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, chloroplast, plasma membrane; Expressed in 23 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Ribosomal protein L28e (InterPro-IPR002672); BEST Arabidopsis thaliana protein match is- Ribosomal L28e protein family (TAIR-AT4G29410.2); Has 531 Blast hits to 531 proteins in 211 species- Archae - 0; Bacteria - 0; Metazoa - 280; Fun [...] (143 aa)
     
  0.999
AT3G53430
Ribosomal protein L11 family protein; Binds directly to 26S ribosomal RNA (166 aa)
   
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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