STRINGSTRING
AT1G02870 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G02870" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G02870Uncharacterized protein (193 aa)    
Predicted Functional Partners:
AT5G04600
RNA recognition motif-containing protein (222 aa)
     
      0.995
AT1G12650
Uncharacterized protein (248 aa)
     
        0.986
AT3G22660
rRNA processing protein-related; Required for the processing of the 27S pre-rRNA (293 aa)
     
      0.985
AT2G37990
Ribosome biogenesis regulatory protein-like protein; Involved in ribosome biogenesis (318 aa)
     
      0.975
AT5G14520
Pescadillo-related protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (590 aa)
     
 
  0.973
MEE21
PIN domain-like family protein (281 aa)
     
        0.972
AT2G19385
Zinc ion binding (275 aa)
     
        0.964
TPK1
Thiamin pyrophosphokinase1; Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP). TPP is an active cofactor for enzymes involved in glycolysis and energy production. Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism (267 aa)
           
  0.956
AT1G52930
Ribosomal RNA processing Brix domain protein (320 aa)
     
      0.954
AT1G23280
MAK16 protein-related (303 aa)
     
        0.952
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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