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AT1G02890 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G02890" - AAA-type ATPase family protein in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G02890AAA-type ATPase family protein; Its function is described as nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; Located in chloroplast; Expressed in 25 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- ATPase, AAA+ type, core (InterPro-IPR003593), ATPase, AAA-type, core (InterPro-IPR003959), ATPase, AAA-type, conserved site (InterPro-IPR003960), SMAD/FHA domain (InterPro-IPR008984); BEST Arabidopsis thaliana protein match is- AAA-type ATPase family protein (TAIR-AT4G02480.1); Has 33727 Blast hits to 31290 pr [...] (1246 aa)    
Predicted Functional Partners:
UBC23
Probable ubiquitin-conjugating enzyme E2 23; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (1102 aa)
     
 
  0.697
CCT
Mediator of RNA polymerase II transcription subunit 12; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general t [...] (2253 aa)
     
   
  0.675
AT4G14250
Putative plant UBX domain-containing protein 14; Structural constituent of ribosome; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular; Contains the following InterPro domains- Translation protein SH3-like (InterPro-IPR008991), UAS (InterPro-IPR006577), Ribosomal protein L2, C-terminal (InterPro-IPR022669), UBX (InterPro-IPR001012), UBA-like (InterPro-IPR009060); BEST Arabidopsis thaliana protein match is- UBX domain-containing protein (TAIR-AT1G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species- Ar [...] (821 aa)
       
 
  0.602
IWS1
Transcription elongation factor (TFIIS) family protein; Transcription factor involved in RNA polymerase II (RNAPII) transcription regulation. Involved in transcription elongation. May function at post-recruitment and elongation steps of transcription. May be recruited by BZR2/BES1 to target genes and promote their expression during transcription elongation process. Required for brassinosteroid (BR)-induced gene expression. Required the for regulation of numerous nitrogen-responsive genes in roots. Acts in roots to repress NRT2.1 transcription in response to high nitrogen supply. This r [...] (502 aa)
     
   
  0.592
AT5G15400
Probable ubiquitin conjugation factor E4; Ubiquitin-protein ligase that may function as an E3 ligase in conjunction with specific E1 and E2 ligases. May also function as an E4 ligase mediating the assembly of polyubiquitin chain assembly on substrates monoubiquitinated by another E3 ubiquitin ligase (1038 aa)
     
 
  0.587
AT1G80910
Vacuolar fusion protein CCZ1 homolog B; Plays an important role in membrane trafficking through the secretory apparatus. In complex with MON1, acts as a guanine exchange factor (GEF) for RABG3F of the RAB7 protein family. Promotes the exchange of GDP to GTP, converting RABG3F from an inactive GDP-bound form into an active GTP-bound form. The RABG3F active form is involved in protein trafficking from prevacuolar compartments (PVCs) to vacuoles. May serve as a linker between Rab5 and Rab7 protein families in PVCs and mediate PVC maturation (497 aa)
     
   
  0.582
AT1G16020
Vacuolar fusion protein CCZ1 homolog A; Plays an important role in membrane trafficking through the secretory apparatus. In complex with MON1, acts as a guanine exchange factor (GEF) for RABG3F of the Rab7 protein family. Promotes the exchange of GDP to GTP, converting RABG3F from an inactive GDP-bound form into an active GTP-bound form. The RABG3F active form is involved in protein trafficking from prevacuolar compartments (PVCs) to vacuoles. May serve as a linker between Rab5 and Rab7 protein families in PVCs and mediate PVC maturation (515 aa)
     
   
  0.582
REME1
Pentatricopeptide repeat-containing protein At2g03880, mitochondrial; Pentatricopeptide repeat (PPR) superfamily protein; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR-AT3G24000.1); Has 41924 Blast hits to 14587 proteins in 276 species- Archae - 3; Bacteria - 26; Metazoa - 84; Fungi - 128; Plants - 40967; Viruses - 0; Other Eukaryotes - 716 (source- NCBI BLink) (630 aa)
           
  0.581
IWS2
Transcription elongation factor (TFIIS) family protein; Transcription factor involved in RNA polymerase II (RNAPII) transcription regulation. Involved in transcription elongation. May function at post-recruitment and elongation steps of transcription; Belongs to the IWS1 family (406 aa)
           
  0.576
NPL41
NPL4-like protein 1; May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome (413 aa)
     
 
  0.527
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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