STRINGSTRING
RALF1 protein (Arabidopsis thaliana) - STRING interaction network
"RALF1" - Rapid alkalinization factor 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RALF1Rapid alkalinization factor 1; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases. Mostly active in roots. Prevents plant growth (e.g. root and leaf length). Suppresses cell elongation of the primary root by activating the cell surface receptor FER and triggering phosp [...] (120 aa)    
Predicted Functional Partners:
FER
FERONIA; Receptor-like protein kinase that mediates the female control of male gamete delivery during fertilization, including growth cessation of compatible pollen tubes ensuring a reproductive isolation barriers, by regulating MLO7 subcellular polarization upon pollen tube perception in the female gametophyte synergids. Required for cell elongation during vegetative growth, mostly in a brassinosteroids- (BR-) independent manner. Acts as an upstream regulator for the Rac/Rop-signaling pathway that controls ROS-mediated root hair development. Seems to regulates a cross- talk between br [...] (895 aa)
       
 
  0.846
AT5G19800
Hydroxyproline-rich glycoprotein family protein (96 aa)
           
  0.680
AT4G16100
Uncharacterized protein (394 aa)
           
  0.637
NIC3
Nicotinamidase 3; Catalyzes the deamidation of nicotinamide, an early step in the NAD(+) salvage pathway. Prevents the accumulation of intracellular nicotinamide, a known inhibitor of poly(ADP-ribose) polymerases (PARP enzymes) (198 aa)
           
  0.631
AT5G61350
Protein kinase superfamily protein (842 aa)
           
  0.555
AT4G39110
Putative receptor-like protein kinase (878 aa)
           
  0.551
AT2G21480
Malectin/receptor-like protein kinase (871 aa)
           
  0.551
AT4G32140
EamA-like transporter family (394 aa)
           
  0.550
F26A9.4
SUPPRESSOR OF LLP1 1; Possesses in vitro carboxypeptidase activity against the C-terminal arginine and lysine residues. Involved in the maturation of CLE19. Removes the C-terminal arginine residue of CLE19 proprotein. The cleavage of the C-terminal arginine residue is necessary for CLE19 activity in vivo. Is not involved in generating active CLV3 (PubMed-24118638). Is not involved in CLE19 or CLV3 perception (PubMed-12932329, PubMed-24118638) (491 aa)
           
  0.508
ANX2
ANXUR2; Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell (858 aa)
           
  0.489
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (6%) [HD]