STRINGSTRING
AT1G03040 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03040" - Transcription factor bHLH7 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G03040Transcription factor bHLH7 (302 aa)    
Predicted Functional Partners:
AT5G03495
RNA-binding (RRM/RBD/RNP motifs) family protein (226 aa)
           
  0.959
AT3G27420
Uncharacterized protein (244 aa)
           
  0.959
SPX4
SPX domain gene 4 (318 aa)
       
 
  0.955
AT5G11980
Conserved oligomeric Golgi complex component-related protein (569 aa)
       
 
  0.941
UNE12
Transcription factor UNE12; Required for ovule fertilization (310 aa)
     
 
0.864
AT1G31050
Basic helix-loop-helix domain-containing protein (434 aa)
       
      0.856
AT4G24840
Uncharacterized protein (756 aa)
           
  0.764
PYE
POPEYE (240 aa)
       
      0.588
PAR1
PHY RAPIDLY REGULATED 1; Atypical bHLH transcription factor that acts as negative regulator of a variety of shade avoidance syndrome (SAS) responses, including seedling elongation and photosynthetic pigment accumulation. Acts as direct transcriptional repressor of two auxin-responsive genes, SAUR15 and SAUR68. May function in integrating shade and hormone transcriptional networks in response to light and auxin changes (118 aa)
       
      0.588
BRM
BRAHMA; ATPase subunit of a multiprotein complex equivalent of the SWI/SNF complex that acts by remodeling the chromatin by catalyzing an ATP-dependent alteration in the structure of nucleosomal DNA. Represses embryonic genes in leaves and controls shoot development and flowering. Activates flower homeotic genes (2193 aa)
       
      0.449
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (11%) [HD]