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AT1G03040 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03040" - Basic helix-loop-helix in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G03040Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, acetyl-CoA biosynthetic process from pyruvate; Located in nucleus; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Helix-loop-helix DNA-binding domain (InterPro-IPR001092), Helix-loop-helix DNA-binding (InterPro-IPR011598); BEST Arabidopsis thaliana protein match is- basic helix-loop-helix (bHLH) DNA-binding superfamily p [...] (302 aa)    
Predicted Functional Partners:
AT5G11980
Conserved oligomeric Golgi complex component-related / COG complex component-related; Contains the following InterPro domains- Conserved oligomeric Golgi complex, subunit 8 (InterPro-IPR016632), Dor1-like protein (InterPro-IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink); Belongs to the COG8 family (569 aa)
       
 
  0.988
AT5G03495
RNA-binding (RRM/RBD/RNP motifs) family protein; Its function is described as nucleotide binding; Involved in biological_process unknown; Located in cellular_component unknown; Contains the following InterPro domains- Nucleotide-binding, alpha-beta plait (InterPro-IPR012677); BEST Arabidopsis thaliana protein match is- RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR-AT5G03480.1); Has 197 Blast hits to 129 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 193; Viruses - 0; Other Eukaryotes - 4 (source- NCBI BLink) (226 aa)
           
  0.968
AT3G27420
Bromodomain testis-specific protein; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G40600.1); Has 43 Blast hits to 43 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink) (244 aa)
           
  0.968
SPX4
SPX domain gene 4 (SPX4); Contains the following InterPro domains- SPX, N-terminal (InterPro-IPR004331); BEST Arabidopsis thaliana protein match is- SPX domain gene 1 (TAIR-AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (318 aa)
       
 
  0.965
AT4G24840
Oligomeric golgi complex subunit-like protein; Its function is described as molecular_function unknown; Involved in protein transport, Golgi organization; Located in vacuole; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- COG complex component, COG2 (InterPro-IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (756 aa)
           
  0.951
PAR1
Transcription factor PAR1; Encodes PHYTOCHROME RAPIDLY REGULATED1 (PAR1), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR2 (At3g58850). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510) (118 aa)
       
 
  0.911
UNE12
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Required for ovule fertilization (310 aa)
     
 
0.796
PYE
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots (240 aa)
       
      0.762
AT1G31050
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Its function is described as sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription; Located in nucleus; Expressed in sperm cell, hypocotyl, root; Contains the following InterPro domains- Helix-loop-helix DNA-binding (InterPro-IPR011598); BEST Arabidopsis thaliana protein match is- basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR-AT1G61660.3); Has 358 Blast hits to 358 proteins in 18 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viru [...] (434 aa)
       
      0.762
APRR2
CheY-like two-component responsive regulator family protein; Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9); Belongs to the ARR-like family (535 aa)
           
  0.679
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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