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AT1G03100 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03100" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
AT1G03100Pentatricopeptide repeat-containing protein (793 aa)    
Predicted Functional Partners:
AT3G09670
PWWP domain-containing protein (726 aa)
     
   
  0.873
MCM8
Minichromosome maintenance 8 (777 aa)
     
   
  0.865
HCF164
Thioredoxin-like protein HCF164; Thiol-disulfide oxidoreductase that participates in various redox reactions in the chloroplast. Mediates the reduction of PSI-N in the thylakoid lumen. May interact and probably reduce other target proteins of the thylakoid membrane, such as FTSH2, FTSH8, LHCB5, atpA, atpB, atpE, petA and petC. Involved in the biogenesis of the plastid cytochrome b6f complex. Reducing equivalents are provided by stromal M-type thioredoxins and probably transduced through the thylakoid membrane by CCDA. Possesses low insulin disulfide bonds reducing activity (261 aa)
           
  0.470
CRS1
Ortholog of maize chloroplast splicing factor CRS1; Required for the splicing of group IIA introns in chloroplasts, by regulating the intron folding. Forms splicing particles with RNA. May also be involved in chloroplast protein translation (720 aa)
           
  0.447
AT3G58590
Pentatricopeptide repeat-containing protein (741 aa)
     
        0.437
POP1
Ribonuclease P (826 aa)
     
        0.435
SLG1
SLOW GROWTH 1 (849 aa)
     
        0.430
HCF107
High chlorophyll fluorescent 107; Involved, directly or indirectly, in the processing of chloroplast encoded mRNAs. Exhibits sequence-specific RNA binding and RNA remodeling activities, probably leading to the activation of translation of the target gene cluster psbB-psbT-psbH-petB-petD (PubMed-22451905). Blocks 5’-3’ and 3’-5’ exoribonucleases (e.g. polynucleotide phosphorylase (PNPase), RNase R) in vitro (PubMed-22451905). Necessary for intercistronic RNA processing of the psbH 5’ untranslated region or the stabilization of 5’ processed psbH RNAs. Also required for the synthesis of p [...] (652 aa)
           
  0.424
AT3G09440
Protein heat shock protein 70-3; In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage (By similarity) (649 aa)
           
  0.424
AT1G21350
Thioredoxin-like protein (252 aa)
           
  0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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