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TRM82 protein (Arabidopsis thaliana) - STRING interaction network
"TRM82" - tRNA modification 82 in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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TRM82tRNA modification 82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit (427 aa)    
Predicted Functional Partners:
AT3G26410
tRNA modification 11 (477 aa)
     
   
  0.907
TRM5
TON1 Recruiting Motif 5 (540 aa)
     
   
  0.849
AT5G14520
Pescadillo-related protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (590 aa)
     
 
  0.753
AT2G31580
tRNAHis guanylyltransferase; Adds a GMP to the 5’-end of tRNA(His) after transcription and RNase P cleavage (567 aa)
           
  0.737
AT1G79150
Binding (830 aa)
     
      0.718
RACK1C_AT
Receptor for activated C kinase 1C; Minor component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways. Involved in multiple hormone responses and developmental processes (PubMed-18947417). MAPK cascade scaffolding protein involved in the protease IV and ArgC signaling pathway but not the flg22 pathway (PubMed-25731164) (326 aa)
     
   
  0.705
AT5G06350
ARM repeat superfamily protein (877 aa)
     
 
  0.704
CPSF160
Cleavage and polyadenylation specificity factor 160; CPSF plays a key role in pre-mRNA 3’-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. This subunit is involved in the RNA recognition step of the polyadenylation reaction (1442 aa)
     
 
  0.695
CPSF30
Cleavage and polyadenylation specificity factor 30; Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3’-end formation. May interact with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition (By similarity). Mediates poly(A) site selection (PubMed-23136375). Binds RNA in a calcium-dependent manner (PubMed-16500995, PubMed-17576667, PubMed-20214900). Exhibits endonuclease activity with an ability to nick and degrade linear as well as circular single-stranded RNA that leaves RNA 3’ ends with hydro [...] (631 aa)
     
 
  0.694
FIP1[V]
FIP1 [V]-like protein; Essential gene (PubMed-16282318). Component of the cleavage and polyadenylation specificity factor (CPSF) complex that plays a key role in pre-mRNA 3’-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. FIP1L1 contributes to poly(A) site recognition and stimulates poly(A) addition. Binds to U-rich RNA sequence elements surrounding the poly(A) site. May act to tether poly(A) polymerase to the CPSF complex (By similarity) (1196 aa)
     
 
  0.684
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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