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AT1G03140 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03140" - Splicing factor Prp18-like protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Databases
Textmining
[Homology]
Score
AT1G03140Splicing factor Prp18-like protein (420 aa)    
Predicted Functional Partners:
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
     
 
  0.964
AT1G03150
Peptide alpha-N-acetyltransferase (174 aa)
     
   
  0.913
AT5G58450
Tetratricopeptide repeat-containing protein (1065 aa)
           
  0.879
MAK10
MAK10 homologue (728 aa)
           
  0.861
F5I14.19
SWELLMAP 1; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3’- splice site to generate spliced mRNA and the excised lariat intron (535 aa)
     
 
  0.820
SMP2
SWELLMAP 2; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3’- splice site to generate spliced mRNA and the excised lariat intron (536 aa)
     
 
  0.805
AT3G45950
Pre-mRNA splicing Prp18-interacting factor (385 aa)
     
 
  0.805
AT1G54590
Splicing factor Prp18 domain-containing protein (361 aa)
         
 
0.800
AT5G10370
Helicase , IBR and zinc finger protein domain-containing protein (1775 aa)
     
 
  0.781
AT4G01020
Zinc finger-related and helicase and IBR domain-containing protein (1787 aa)
     
 
  0.781
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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