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AT1G03210 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03210" - Phenazine biosynthesis PhzC/PhzF protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G03210Phenazine biosynthesis PhzC/PhzF protein (286 aa)    
Predicted Functional Partners:
AT5G46430
Ribosomal protein L32e (133 aa)
       
      0.817
AT4G18100
Ribosomal protein L32e (133 aa)
       
      0.817
AT4G14320.2
60S ribosomal protein L36a (154 aa)
       
      0.627
AT3G23390
60S ribosomal protein L36a (105 aa)
       
      0.627
AT5G56670.1
40S ribosomal protein S30 (62 aa)
       
      0.612
AT4G29390.1
40S ribosomal protein S30 (62 aa)
       
      0.612
AT2G19750
40S ribosomal protein S30 (62 aa)
       
      0.612
AT5G64490
ARM repeat superfamily protein; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3’-UTR of target mRNAs (187 aa)
       
      0.523
PUM19
Pumilio 19; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3’-UTR of target mRNAs (327 aa)
       
      0.523
PUM18
Pumilio 18; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3’-UTR of target mRNAs (327 aa)
       
      0.523
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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