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AT1G03220 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03220" - Aspartyl protease-like protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G03220Aspartyl protease-like protein (433 aa)    
Predicted Functional Partners:
AT5G20950
Glycosyl hydrolase family protein (624 aa)
           
  0.802
AT1G33590
Leucine-rich repeat-containing protein (477 aa)
     
   
  0.711
AT1G33600
Leucine-rich repeat-containing protein (478 aa)
           
  0.707
AT4G19400
Pectinacetylesterase family protein; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (517 aa)
     
   
  0.691
DGR2
Uncharacterized protein (369 aa)
           
  0.676
AT5G12940
Leucine-rich repeat-containing protein (371 aa)
           
  0.675
AT3G16370
GDSL esterase/lipase APG (353 aa)
           
  0.675
GL22
Germin-like protein subfamily 2 member 2; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved (219 aa)
           
  0.675
AGAL1
Alpha-galactosidase 1; May regulate leaf (and possibly other organ) development by functioning in cell wall loosening and cell wall expansion (410 aa)
           
  0.672
AT5G48540
Cysteine-rich repeat secretory protein 55 (263 aa)
     
   
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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