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AT1G03230 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03230" - Aspartyl protease-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G03230Aspartyl protease-like protein (434 aa)    
Predicted Functional Partners:
scpl18
Serine carboxypeptidase-like 18; Probable carboxypeptidase (446 aa)
     
 
  0.536
SCPL15
Serine carboxypeptidase-like 15; Probable carboxypeptidase (436 aa)
     
 
  0.493
scpl42
Serine carboxypeptidase-like 42; Probable carboxypeptidase (473 aa)
     
 
  0.477
scpl41
Serine carboxypeptidase-like 41; Probable carboxypeptidase (469 aa)
     
 
  0.477
scpl1
Serine carboxypeptidase-like 1; Probable carboxypeptidase (441 aa)
     
 
  0.477
SCPL34
Carboxypeptidase D; Probable carboxypeptidase (499 aa)
     
 
  0.477
scpl47
Carboxypeptidase; Probable carboxypeptidase (505 aa)
     
 
  0.477
AT5G22960
Putative serine carboxypeptidase-like 54 (190 aa)
     
 
  0.477
SCPL19
Serine carboxypeptidase-like 19; Involved in plants secondary metabolism. Functions as acyltransferase to form the sinapate ester sinapoylcholine also known as sinapine. Able to convert in vitro benzoylglucose into benzoylcholine (465 aa)
     
 
  0.477
scpl35
Serine carboxypeptidase-like 35; Probable carboxypeptidase (480 aa)
     
 
  0.477
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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