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AT1G03260 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03260" - SNARE associated Golgi protein family in Arabidopsis thaliana
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
protein homology
Your Input:
Gene Fusion
AT1G03260SNARE associated Golgi protein family; Located in endomembrane system; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- SNARE associated Golgi protein (InterPro-IPR015414); BEST Arabidopsis thaliana protein match is- SNARE associated Golgi protein family (TAIR-AT5G19070.1); Has 5379 Blast hits to 5379 proteins in 1283 species- Archae - 29; Bacteria - 3492; Metazoa - 274; Fungi - 131; Plants - 303; Viruses - 0; Other Eukaryotes - 1150 (source- NCBI BLink) (274 aa)    
Predicted Functional Partners:
Zinc knuckle (CCHC-type) family protein; Its function is described as zinc ion binding, nucleic acid binding; Involved in cell cycle, replication fork protection, response to DNA damage stimulus; Located in nucleus, chloroplast; Expressed in 20 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Replication fork protection component Swi3 (InterPro-IPR012923), Zinc finger, CCHC-type (InterPro-IPR001878); Has 415 Blast hits to 415 proteins in 134 species- Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukary [...] (282 aa)
Golgi apparatus membrane protein-like protein ECHIDNA; Mediates trans-Golgi-network trafficking and cell elongation. Required for keeping the appropriate balance between secretory trafficking and vacuolar targeting of a subset of proteins (186 aa)
Phosphotyrosyl phosphatase activator (PTPA) family protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (392 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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