STRINGSTRING
ATDUF1 protein (Arabidopsis thaliana) - STRING interaction network
"ATDUF1" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATDUF1Uncharacterized protein (670 aa)    
Predicted Functional Partners:
AT5G04350
Self-incompatibility S1 family protein (146 aa)
           
  0.670
AT4G04750
Sugar transporter ERD6-like 14; Sugar transporter (482 aa)
           
  0.670
AT1G01130
Uncharacterized protein (124 aa)
           
  0.670
AT1G45100
RNA recognition motif-containing protein (497 aa)
           
  0.600
AT1G14680
Uncharacterized protein (290 aa)
     
   
  0.581
AT5G52090
tRNA-splicing endonuclease positive effector-related protein (676 aa)
           
  0.558
AT5G37150
DEXDc and putative helicase domain-containing protein (839 aa)
           
  0.558
AT5G28220
O-linked GlcNAc transferase-like protein (316 aa)
           
  0.558
AT5G28210
mRNA capping enzyme family protein (625 aa)
           
  0.558
AT5G23600
tRNA 2’phosphotransferase (212 aa)
           
  0.558
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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