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AT1G03365 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03365" - Zinc ion binding protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
Databases
Textmining
[Homology]
Score
AT1G03365Zinc ion binding protein (823 aa)    
Predicted Functional Partners:
AT1G58848
Putative disease resistance protein RDL6/RF9; Potential disease resistance protein (1049 aa)
           
  0.924
AT1G12190
F-box and associated interaction domain-containing protein (375 aa)
           
  0.863
RING1B
RING 1B; Putative E3 ubiquitin-protein ligase that mediates monoubiquitination of ’Lys-119’ of histone H2A (H2AK119ub), thereby playing a central role in histone code and gene regulation (468 aa)
           
  0.863
HCF109
High chlorophyll fluorescent 109; Directs the termination of translation in response to the peptide chain termination codon UGA. Required for the proper translation, stability and normal processing of UGA-containing polycistronic transcripts in chloroplasts (456 aa)
           
  0.739
ORF291
Encodes a cytochrome c oxidase subunit II (291 aa)
           
  0.670
AT4G05630
Uncharacterized protein (124 aa)
           
  0.637
PMS1
POSTMEIOTIC SEGREGATION 1; Required for DNA mismatch repair (MMR), correcting base- base mismatches and insertion-deletion loops (IDLs) resulting from DNA replication, DNA damage or from recombination events between non-identical sequences during meiosis. Component of the MutLalpha heterodimer that forms a ternary complex with the MutS heterodimers, which initially recognize the DNA mismatches. This complex is thought to be responsible for directing the downsteam MMR events, including strand discrimination, excision, and resynthesis. Plays a major role in maintaining the genetic stabil [...] (923 aa)
     
   
  0.594
SSL3
Strictosidine synthase-like 3 (390 aa)
           
  0.557
ORF77.2
Protein precursor Ycf15, putative, chloroplast (77 aa)
           
  0.508
RFL1
RPS5-like 1; Disease resistance (R) protein (885 aa)
           
  0.508
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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