STRINGSTRING
SCAMP4 protein (Arabidopsis thaliana) - STRING interaction network
"SCAMP4" - Secretory carrier membrane protein 4 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP4Secretory carrier membrane protein 4; Probably involved in membrane trafficking (283 aa)    
Predicted Functional Partners:
COAB
Phosphopantothenate--cysteine ligase 1; Catalyzes the first step in the biosynthesis of coenzyme A from vitamin B5, where cysteine is conjugated to 4’- phosphopantothenate to form 4-phosphopantothenoylcysteine (317 aa)
           
  0.801
AT2G26520
Uncharacterized protein (145 aa)
           
  0.737
AT5G51510
Uncharacterized protein (170 aa)
       
      0.610
DGL1
DEFECTIVE GLYCOSYLATION; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (437 aa)
       
      0.604
PLDGAMMA2
Phospholipase D gamma 2; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Plays an important role in various cellular processes, including phytohormone action, vesicular trafficking, secretion, cytoskeletal arrangement, meiosis, tumor promotion, pathogenesis, membrane deterioration and senescence. Can use phosphatidylserine but prefers ethanolamine-containing lipids as substrates. Can use phosphatidylcholine (PC) as substrates in the presence of phosphatidylethanolamine (PE) and PIP2 (PubMed-17098468). Involved in membrane lip [...] (856 aa)
     
 
  0.556
PLDP1
Phospholipase D P1; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Phosphatidylcholine-selective (PubMed-11891260). Regulates root- hair morphogenesis (PubMed-12775839). Contributes to the supply of inorganic phosphorus for cell metabolism and diacylglycerol moieties for galactolipid synthesis in phosphorus-starved roots (PubMed-16891548). Involved in root elongation during phosphate limitation (PubMed-16384909) (1096 aa)
     
 
  0.504
emb2734
Embryo defective 2734 (1116 aa)
       
      0.491
AT4G27640
ARM repeat superfamily protein (1048 aa)
       
      0.491
AT2G05590
TLD-domain containing nucleolar protein (303 aa)
           
  0.479
PUM24
Pumilio 24; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3’-UTR of target mRNAs (641 aa)
           
  0.478
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (7%) [HD]