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AT1G03620 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03620" - ELMO/CED-12 family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
AT1G03620ELMO/CED-12 family protein; Its function is described as molecular_function unknown; Involved in phagocytosis; Located in cytoskeleton; Expressed in 16 plant structures; Expressed during 6 growth stages; Contains the following InterPro domains- Engulfment/cell motility, ELMO (InterPro-IPR006816); BEST Arabidopsis thaliana protein match is- ELMO/CED-12 family protein (TAIR-AT3G03610.1); Has 828 Blast hits to 828 proteins in 138 species- Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 41; Plants - 178; Viruses - 0; Other Eukaryotes - 118 (source- NCBI BLink) (265 aa)    
Predicted Functional Partners:
AT4G10050
Esterase/lipase/thioesterase family protein; Demethylates proteins that have been reversibly carboxymethylated (350 aa)
           
  0.491
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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