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AT1G03620 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03620" - ELMO/CED-12 family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G03620ELMO/CED-12 family protein (265 aa)    
Predicted Functional Partners:
TPPF
Trehalose-6-phosphate phosphatase F; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity) (368 aa)
     
        0.447
AT2G35920
RNA helicase family protein (995 aa)
     
        0.436
SUS1
Sucrose synthase 1; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (808 aa)
     
        0.435
CPuORF26
Uncharacerized protein (24 aa)
     
        0.435
AT1G44542
Cyclase-like protein (271 aa)
     
        0.435
AT1G21722
Uncharacterized protein (233 aa)
     
        0.423
AT1G54200
Uncharacterized protein; Involved in auxin transport. Regulator of the auxin signaling pathway (366 aa)
     
        0.422
AT1G33270
Patatin-like phospholipase domain-containing protein; Lipolytic acyl hydrolase (LAH) (369 aa)
     
   
  0.411
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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