STRINGSTRING
AT1G03820 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03820" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G03820Uncharacterized protein (222 aa)    
Predicted Functional Partners:
AT1G28400
Uncharacterized protein (335 aa)
     
   
  0.822
AT4G08160
Encodes a putative glycosyl hydrolase family 10 protein (xylanase) (752 aa)
           
  0.738
AT3G62160
HXXXD-type acyl-transferase-like protein (428 aa)
           
  0.707
AT1G26450
Carbohydrate-binding X8 domain-containing protein (197 aa)
     
   
  0.680
AGP27
Arabinogalactan protein 27; Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death (125 aa)
     
   
  0.670
AT4G08370
Proline-rich extensin-like family protein (350 aa)
           
  0.670
AT2G22510
Hydroxyproline-rich glycoprotein family protein (124 aa)
           
  0.670
AT1G60200
RNA-binding protein 25 (899 aa)
           
  0.670
AT1G31250
Proline-rich family protein (165 aa)
           
  0.670
AT3G54580
Proline-rich extensin-like family protein; Structural component which strengthens the primary cell wall (951 aa)
           
  0.638
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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