STRINGSTRING
ABCI19 protein (Arabidopsis thaliana) - STRING interaction network
"ABCI19" - ATP-binding cassette I19 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCI19ATP-binding cassette I19 (290 aa)    
Predicted Functional Partners:
ABCI20
Member of NAP subfamily (354 aa)
   
 
0.831
HOG1
Adenosylhomocysteinase 1; Adenosylhomocysteine is a competitive inhibitor of S- adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Required for DNA methylation-dependent gene silencing (485 aa)
       
      0.817
SAHH2
Adenosylhomocysteinase 2; Adenosylhomocysteine is a competitive inhibitor of S- adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine (485 aa)
       
      0.817
ABCI4
ATP-binding cassette I4 (736 aa)
           
  0.559
ABCI12
Protein ABCI12 (391 aa)
           
  0.558
ABCA10
Member of ATH subfamily (848 aa)
           
  0.552
ABCG17
ATP-binding cassette G17 (662 aa)
           
  0.552
ABCG27
ATP-binding cassette G27 (784 aa)
           
  0.552
ABCA8
ATP-binding cassette A8 (901 aa)
           
  0.552
ABCA6
ATP-binding cassette A6 (900 aa)
           
  0.552
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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