STRINGSTRING
CKL9b protein (Arabidopsis thaliana) - STRING interaction network
"CKL9b" - Dual specificity kinase 1 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL9bDual specificity kinase 1 (471 aa)    
Predicted Functional Partners:
AT1G09820
Pentatricopeptide repeat-containing protein (606 aa)
           
  0.986
AT1G31660
Putative bystin (444 aa)
       
 
  0.871
AT4G29990
Leucine-rich repeat transmembrane protein kinase protein (876 aa)
       
 
  0.835
At2g37250
Adenylate kinase 1; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis, adenine nucleotide metabolism and plant growth (246 aa)
           
  0.803
AT3G51270
RIO kinase 2 (461 aa)
     
 
  0.785
AT1G42440
Uncharacterized protein (793 aa)
     
 
  0.692
DDB1B
DNA damage-binding protein 1b; Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness (By similarity). Plays a role in DNA repair by forming with DDB2 the UV-damaged DNA-binding protein complex (UV-DDB) (By similarity) (1088 aa)
     
      0.691
DDB1A
DNA damage-binding protein 1a; Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes (E2s). Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis- promoting factors such as HY5, HYH and LAF1. Plays a role in DNA repair by forming with DDB2 the UV-damaged DNA-binding protein complex (UV-DDB). Component of the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protei [...] (1088 aa)
     
      0.691
AT3G49990
Uncharacterized protein (502 aa)
       
 
  0.654
AT5G59950
RNA recognition motif-containing protein; Export adapter involved in nuclear export of spliced and unspliced mRNA (245 aa)
       
      0.614
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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