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AT1G03990 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G03990" - Long-chain fatty alcohol dehydrogenase family protein in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
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gene co-occurrence
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textmining
co-expression
protein homology
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AT1G03990Long-chain fatty alcohol dehydrogenase family protein; Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation (758 aa)    
Predicted Functional Partners:
MCM4
Minichromosome maintenance (MCM2/3/5) family protein; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells (847 aa)
           
  0.675
AT5G38900
Thioredoxin superfamily protein; Its function is described as protein disulfide oxidoreductase activity; Involved in defense response to fungus, incompatible interaction; Located in cellular_component unknown; Expressed in 16 plant structures; Expressed during 10 growth stages; Contains the following InterPro domains- DSBA oxidoreductase (InterPro-IPR001853), Thioredoxin-like fold (InterPro-IPR012336); Has 2126 Blast hits to 2126 proteins in 739 species- Archae - 17; Bacteria - 1478; Metazoa - 14; Fungi - 129; Plants - 62; Viruses - 0; Other Eukaryotes - 426 (source- NCBI BLink) (217 aa)
           
  0.588
MCM2
Minichromosome maintenance (MCM2/3/5) family protein; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. May play a crucial role in the control of de-differentiation and cell proliferation processes required for lateral root formation. Is essential for embryo development. Is involved in the geminivirus mungbean yellow mosaic virus (MYMV) DNA replication, presumably in conjunction with other host factors (936 aa)
           
  0.573
CBSX6
Cystathionine beta-synthase (CBS) family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in vacuole; Expressed in cultured cell; Contains the following InterPro domains- Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- CBS domain-containing protein (TAIR-AT5G53750.1); Has 145 Blast hits to 144 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (425 aa)
     
   
  0.571
SUVR2
SET-domain containing protein lysine methyltransferase family protein; Probable inactive histone-lysine methyltransferase that acts as regulator of transctiptional gene silencing independently of histone H3K9 methylation. Contributes to transcriptional gene silencing at RNA-directed DNA methylation (RdDM) target loci but also at RdDM-independent target loci. Forms a complex with SUVR1 and associates with the SNF2-related chromatin-remodeling proteins CHR19, CHR27, and CHR28, thereby mediating nucleosome positioning and transcriptional silencing. Does not possess histone-lysine methyltr [...] (740 aa)
           
  0.571
SUVR4
SET-domain containing protein lysine methyltransferase family protein; Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific [...] (492 aa)
           
  0.571
SUVR1
Probable inactive histone-lysine N-methyltransferase SUVR1; Encodes SUVR1, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation [...] (734 aa)
           
  0.571
AT5G21070
Fe(3+) dicitrate transport system permease; Unknown protein; Has 115 Blast hits to 115 proteins in 34 species- Archae - 1; Bacteria - 36; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 18 (source- NCBI BLink) (225 aa)
           
  0.570
IDH-III
Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. In contrast to the broadly expressed other regulatory (IDH-I and IDH-II) and catalytic (IDH-V and IDH-VI) subunits of this enzyme, IDH-III expression appears to be restricted largely to pollen (368 aa)
           
  0.568
TUB4
Tubulin beta-4 chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain; Belongs to the tubulin family (444 aa)
           
  0.567
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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